STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C01B10.4COesterase domain-containing protein. (580 aa)    
Predicted Functional Partners:
Y57G11C.22
Uncharacterized protein.
   
 
 0.550
K07C5.2
Aldo_ket_red domain-containing protein.
  
  
 0.468
crn-7
Cell-death-related nuclease 7; Belongs to the DNase II family.
   
    0.463
ptp-4
Tyrosine-protein phosphatase 4.
   
   0.462
C28H8.2
Uncharacterized protein C28H8.2.
   
    0.457
C05C8.1
Uncharacterized protein.
   
    0.455
ugt-54
UDP-GlucuronosylTransferase.
 
 
    0.455
crp-1
Cdc-42 Related Protein.
   
    0.454
gana-1
Alpha-galactosidase.
   
    0.442
afmd-1
Abhydrolase_3 domain-containing protein.
  
  
 0.436
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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