STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nspb-10Nematode Specific Peptide family, group B. (79 aa)    
Predicted Functional Partners:
abu-6
Activated in Blocked Unfolded protein response.
   
  
 0.815
abu-10
Activated in Blocked Unfolded protein response.
   
  
 0.806
nspe-7
Nematode Specific Peptide family, group E.
      
 0.806
abu-1
Activated in Blocked Unfolded protein response.
   
  
 0.766
col-91
Putative cuticle collagen 91; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment (By similarity).
   
  
 0.736
col-150
Col_cuticle_N domain-containing protein.
   
  
 0.720
col-180
Col_cuticle_N domain-containing protein.
   
  
 0.720
nspe-5
Nematode Specific Peptide family, group E.
      
 0.699
ugt-29
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
      
 0.698
ugt-54
UDP-GlucuronosylTransferase.
      
 0.694
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.