STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C01G5.9Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (426 aa)    
Predicted Functional Partners:
crp-1
Cdc-42 Related Protein.
   
    0.491
cpn-2
Transgelin; Belongs to the calponin family.
   
    0.482
crn-7
Cell-death-related nuclease 7; Belongs to the DNase II family.
   
    0.452
gei-1
START domain-containing protein.
   
    0.435
glrx-5
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
   
    0.433
ZK353.2
Uncharacterized protein ZK353.2.
   
    0.422
lev-1
Acetylcholine receptor subunit beta-type lev-1; Non-alpha subunit of nicotinic acetylcholine receptor (nAChR). Involved in nAChR sensitivity to nicotine. Belongs to the ligand-gated ion channel (TC 1.A.9) family. Acetylcholine receptor (TC 1.A.9.1) subfamily.
   
    0.418
nol-6
Nucleolar protein 6.
   
    0.416
trpl-2
TRP-channel-Like.
   
    0.410
F23H11.2
TATA box-binding protein-associated factor RNA polymerase I subunit B; Component of RNA polymerase I core factor complex that acts as a GTF2B/TFIIB-like factor and plays a key role in multiple steps during transcription initiation such as pre-initiation complex (PIC) assembly and postpolymerase recruitment events in polymerase I (Pol I) transcription. Binds rDNA promoters and plays a role in Pol I recruitment (By similarity).
   
    0.406
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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