STRINGSTRING
C01H6.6 protein (Caenorhabditis elegans) - STRING interaction network
"C01H6.6" - Protein C01H6.6 in Caenorhabditis elegans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C01H6.6Protein C01H6.6 (452 aa)    
Predicted Functional Partners:
W07E11.1
Uncharacterized protein (2175 aa)
   
   
  0.989
prl-1
Protein PRL-1; Putative prenylated protein tyrosine phosphatase (190 aa)
       
      0.869
metr-1
Probable methionine synthase ; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) (1249 aa)
       
    0.677
T08B2.7
Protein T08B2.7, isoform c (781 aa)
   
 
    0.653
ech-1
Enoyl-CoA Hydratase family member (ech-1) (755 aa)
   
 
    0.653
tax-6
Abnormal CHEmotaxis family member (tax-6) (542 aa)
   
        0.558
cin-4
Chromosome INstability family member (cin-4) ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (842 aa)
   
   
  0.554
R05D3.12
Putative DNA topoisomerase 2, mitochondrial ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity) (1170 aa)
   
   
  0.554
top-2
Probable DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (By similarity) (1520 aa)
   
   
  0.554
dnj-27
DNaJ domain (prokaryotic heat shock protein) family member (dnj-27) (788 aa)
   
   
  0.539
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Caenorhabditis elegans, Rhabditis elegans, nematode
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