STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swsn-9Bromo domain-containing protein. (636 aa)    
Predicted Functional Partners:
swsn-7
SWI/SNF nucleosome remodeling complex component.
   
 
 0.996
swsn-1
SANT domain-containing protein.
   
 
 0.991
swsn-3
HMG box domain-containing protein.
   
 
 0.987
phf-10
PHD-type domain-containing protein.
   
 
 0.986
pbrm-1
HMG box domain-containing protein.
   
 
0.975
swsn-6
SWI/SNF nucleosome remodeling complex component; Belongs to the actin family.
   
 
 0.971
swsn-2.2
SWIB domain-containing protein.
   
 
 0.962
snfc-5
SNF chromatin remodeling Complex component; Belongs to the SNF5 family.
   
 
 0.947
dpff-1
Zinc finger protein dpff-1; Belongs to the requiem/DPF family.
   
 
 0.938
ham-3
SWIB domain-containing protein.
   
 
 0.929
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.