STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C02F5.5Uncharacterized protein C02F5.5. (173 aa)    
Predicted Functional Partners:
spch-2
SPerm CHromatin enriched.
   
  
 0.948
T09B4.5
Uncharacterized protein.
      
 0.911
K08C9.2
Uncharacterized protein.
   
    0.742
C34D4.3
MSP domain-containing protein.
   
    0.688
F17E9.5
Uncharacterized protein.
   
   
0.688
C33F10.1
Uncharacterized protein.
   
    0.677
rbr-2
Lysine-specific demethylase rbr-2; Histone demethylase that specifically demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9', H3 'Lys- 27', H3 'Lys-36', H3 'Lys-79' or H4 'Lys-20'. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-4'. Required for normal longevity of the soma in a germline-dependent manner. Implicated in the epigenetic inheritance of lifespan over several generations. Involved in larval development and vulva formation.
      
 0.668
K01H12.4
Uncharacterized protein.
   
    0.666
dod-22
CUB_2 domain-containing protein.
      
 0.660
C31H1.5
Uncharacterized protein.
   
    0.644
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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