Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cyp-33A1 | dhs-2 | C12D5.7.1 | F55A12.4a.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.633 |
cyp-33A1 | dhs-23 | C12D5.7.1 | R08H2.1.2 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | DeHydrogenases, Short chain. | 0.738 |
cyp-33A1 | dhs-26 | C12D5.7.1 | ZK816.5.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.760 |
cyp-33A1 | hil-2 | C12D5.7.1 | Y73B6BL.9a.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | Histone H1.2; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures. | 0.610 |
cyp-33A1 | hil-7 | C12D5.7.1 | C01B10.5b.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | HIstone H1 Like. | 0.568 |
cyp-33A1 | his-8 | C12D5.7.1 | F45F2.12.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | Histone H2B 2. | 0.684 |
cyp-33A1 | ugt-51 | C12D5.7.1 | C03A7.11.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | UDP-GlucuronosylTransferase. | 0.711 |
cyp-33E3 | ugt-51 | F42A9.4.1 | C03A7.11.1 | CYtochrome P450 family. | UDP-GlucuronosylTransferase. | 0.671 |
cyp-34A2 | dhs-2 | T10H4.11.1 | F55A12.4a.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.485 |
cyp-34A2 | dhs-23 | T10H4.11.1 | R08H2.1.2 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | DeHydrogenases, Short chain. | 0.585 |
cyp-34A2 | dhs-26 | T10H4.11.1 | ZK816.5.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.735 |
cyp-34A2 | hil-2 | T10H4.11.1 | Y73B6BL.9a.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | Histone H1.2; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures. | 0.463 |
cyp-34A2 | hil-7 | T10H4.11.1 | C01B10.5b.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | HIstone H1 Like. | 0.461 |
cyp-34A2 | his-8 | T10H4.11.1 | F45F2.12.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | Histone H2B 2. | 0.604 |
cyp-34A2 | ugt-51 | T10H4.11.1 | C03A7.11.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | UDP-GlucuronosylTransferase. | 0.675 |
cyp-35B2 | ugt-51 | K07C6.3.1 | C03A7.11.1 | CYtochrome P450 family; Belongs to the cytochrome P450 family. | UDP-GlucuronosylTransferase. | 0.708 |
dhs-2 | cyp-33A1 | F55A12.4a.1 | C12D5.7.1 | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | CYtochrome P450 family; Belongs to the cytochrome P450 family. | 0.633 |
dhs-2 | cyp-34A2 | F55A12.4a.1 | T10H4.11.1 | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | CYtochrome P450 family; Belongs to the cytochrome P450 family. | 0.485 |
dhs-2 | dhs-26 | F55A12.4a.1 | ZK816.5.1 | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.607 |
dhs-2 | hil-2 | F55A12.4a.1 | Y73B6BL.9a.1 | DeHydrogenases, Short chain; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Histone H1.2; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures. | 0.459 |
page 1 of 4