STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abu-6Activated in Blocked Unfolded protein response. (388 aa)    
Predicted Functional Partners:
abu-10
Activated in Blocked Unfolded protein response.
   
 
 0.906
abu-11
Activated in Blocked Unfolded protein response.
   
  
 0.892
nspb-10
Nematode Specific Peptide family, group B.
   
  
 0.815
abu-15
Activated in Blocked Unfolded protein response.
   
  
0.787
pqn-13
Prion-like-(Q/N-rich)-domain-bearing protein.
   
 
 0.747
sdz-37
SKN-1 Dependent Zygotic transcript.
      
 0.696
Y42A5A.3
Uncharacterized protein.
      
 0.694
abu-12
Activated in Blocked Unfolded protein response.
   
 
 0.676
abu-7
Activated in Blocked Unfolded protein response.
   
  
0.634
abu-1
Activated in Blocked Unfolded protein response.
   
  
0.630
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.