STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C04E6.11Uncharacterized protein. (995 aa)    
Predicted Functional Partners:
mma-1
Uncharacterized protein.
   
  
 0.932
slrp-1
RRM domain-containing protein.
   
 
 0.921
let-630
Uncharacterized protein.
   
  
 0.681
xpo-1
Importin N-terminal domain-containing protein.
   
  
 0.590
gfm-1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
   
  
 0.588
mrps-22
Mitochondrial Ribosomal Protein, Small.
   
  
 0.583
taco-1
Translational Activator of Cytochrome c Oxidase.
   
  
 0.577
F58G1.8
EFG_II domain-containing protein.
   
  
 0.558
elks-1
Mammalian ELKS/CAST/ERC/Rab6 interacting protein homolog.
      
 0.546
eral-1
Uncharacterized GTP-binding protein E02H1.2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.
   
  
 0.545
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (20%) [HD]