STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C04F12.1Piwi domain-containing protein. (944 aa)    
Predicted Functional Partners:
rde-4
RNA interference promoting factor.
   
 0.888
dcr-1
Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily.
   
 0.849
rrf-2
RNA-dependent RNA polymerase Family.
   
  
 0.772
rrf-1
RNA-dependent RNA polymerase Family.
   
  
 0.695
drh-1
Dicer-related helicase.
   
  
 0.679
tag-353
Ubiquitin-like domain-containing protein.
   
  
 0.667
F37D6.3
Uncharacterized protein.
      
 0.664
F14F9.3
Uncharacterized protein.
      
 0.660
Y56A3A.2
Peptidase_M50 domain-containing protein.
      
 0.660
ZK177.8
Uncharacterized protein ZK177.8.
   
  
 0.648
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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