STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C04F12.12Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
clec-117
C-type lectin domain-containing protein.
   
    0.578
C17F3.1
Uncharacterized protein.
   
    0.578
C25D7.1
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.578
C33F10.11
Uncharacterized protein.
   
    0.578
C34D4.3
MSP domain-containing protein.
   
    0.578
ssp-19
Sperm-specific class P protein 19.
   
    0.578
D2062.1
SCP domain-containing protein; Belongs to the CRISP family.
   
    0.578
F32B6.4
Uncharacterized protein.
   
    0.578
F33D11.7
Protein kinase domain-containing protein.
   
    0.578
F56D6.13
Uncharacterized protein.
   
    0.578
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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