STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C04F12.8Uncharacterized protein. (272 aa)    
Predicted Functional Partners:
F15G9.1
Uncharacterized protein F15G9.1.
   
  
 0.815
R31.2
ANK_REP_REGION domain-containing protein.
      
 0.809
mlc-3
Myosin, essential light chain.
   
 
 0.752
anmt-1
Nicotinamide N-methyltransferase; Catalyzes the N-methylation of nicotinamide and other pyridines to form pyridinium ions (By similarity). Involved in regulation of lifespan extension downstream of the sirtuin sir-2.1, probably through its role in nicotinic acid metabolism.
      
 0.695
tni-3
Troponin I 3; Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.
   
  
 0.566
tmd-2
TropoMoDulin.
   
 
 0.533
F21C10.10
Uncharacterized protein.
      
 0.530
gei-15
GEX Interacting protein.
   
  
 0.503
F15G9.5
Uncharacterized protein F15G9.5.
   
  
 0.489
C46G7.2
Uncharacterized protein.
   
  
 0.487
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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