STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srab-2Serpentine Receptor, class AB (Class A-like). (342 aa)    
Predicted Functional Partners:
irld-33
Insulin/EGF-Receptor L Domain protein.
   
  
 0.856
madf-6
MADF domain-containing protein.
      
 0.852
T10B5.10
BED-type domain-containing protein.
      
 0.852
nhr-236
Nuclear receptor domain-containing protein.
      
 0.810
ubxn-1
UBX domain-containing protein 1; Ubiquitin-binding protein which acts as an adapter for ATPase cdc-48.1 and/or cdc-48.2, conferring substrate specificity. Together with ubxn-2 and ubxn-3, plays a role in hermaphrodite spermatogenesis probably by promoting the degradation of sex determination terminal factor tra-1.
      
 0.741
frpr-9
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.741
dcp-66
Deacetylase Complex Protein.
      
 0.660
fbxb-69
FBA_2 domain-containing protein.
      
 0.660
Y22D7AL.16
C2H2-type domain-containing protein.
      
 0.660
gcst-1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.605
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.