STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgp-5p-GlycoProtein related. (1252 aa)    
Predicted Functional Partners:
irg-1
DUF1768 domain-containing protein.
   
  
 0.787
cyp-14A5
CYtochrome P450 family; Belongs to the cytochrome P450 family.
   
 
 0.713
haf-7
HAlF transporter (PGP related).
  
 
0.701
spin-3
MFS domain-containing protein.
   
 
 0.679
nlt-1
Non-specific lipid-transfer protein-like 1.
  
  
 0.678
C14C10.5
Uncharacterized protein.
    
 
 0.670
F14D7.6
MFS domain-containing protein.
   
  
 0.667
pgp-11
p-GlycoProtein related.
  
 
0.640
pgp-6
p-GlycoProtein related.
  
 
0.640
haf-2
HAlF transporter (PGP related).
  
 
0.625
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.