STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fkb-3Peptidylprolyl isomerase. (261 aa)    
Predicted Functional Partners:
fkb-7
Peptidylprolyl isomerase.
   
  
 0.856
lpr-7
LiPocalin-Related protein.
   
  
 0.788
lpr-6
LiPocalin-Related protein.
   
  
 0.731
abu-9
Activated in Blocked Unfolded protein response.
   
 
 0.723
lpr-4
LiPocalin-Related protein.
   
  
 0.718
lpr-1
LiPocalin-Related protein.
   
  
 0.708
tin-9.2
Mitochondrial import inner membrane translocase subunit Tim10B; Component of the TIM22 complex, a complex that mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. The TIM22 complex forms a twin-pore translocase that uses the membrane potential as the external driving force. In the TIM22 complex, it may act as a docking point for the soluble 70 kDa complex that guides the target proteins in transit through the aqueous mitochondrial intermembrane space (By similarity).
      
 0.696
lpr-3
LiPocalin-Related protein.
   
  
 0.670
pes-2.1
F-box domain-containing protein.
      
 0.662
txdc-12.1
Thioredoxin domain-containing protein.
   
 
 0.628
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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