STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C05D12.5Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
ZC239.20
Uncharacterized protein.
   
    0.595
Y38E10A.3
Uncharacterized protein.
   
    0.592
F38C2.7
Uncharacterized protein.
   
    0.581
Y46G5A.28
Uncharacterized protein.
   
    0.555
F56D5.5
Uncharacterized protein.
   
    0.552
sdz-9
SKN-1 Dependent Zygotic transcript.
   
    0.548
ccch-5
CCCH-type zinc finger putative transcription factor.
   
    0.538
Y116A8C.19
Uncharacterized protein.
   
    0.537
tbx-37
Putative T-box protein 37.
   
    0.518
H24K24.2
Uncharacterized protein.
   
    0.473
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.