STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lnp-1Endoplasmic reticulum junction formation protein lunapark-1; Plays a role in tubular endoplasmic reticulum network formation and maintenance (By similarity). May be involved in central nervous system development. Has a presynaptic role in neurotransmission. Likely to operate in synaptogenesis by regulating vesicular transport or localization. Required for correct localization of rab-3 and snb-1; Belongs to the lunapark family. (346 aa)    
Predicted Functional Partners:
AC8.7
annotation not available
      
 0.900
F42G2.2
Uncharacterized protein.
      
 0.900
T19C3.4
Uncharacterized protein T19C3.4.
   
 
 0.899
C25H3.1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.895
R03H10.6
REPA_OB_2 domain-containing protein.
      
 0.895
ZC239.14
BTB domain-containing protein.
      
 0.895
ret-1
Reticulon-like protein.
    
 
 0.865
nspd-7
Nematode Specific Peptide family, group D.
      
 0.854
fbxa-103
F-box domain-containing protein.
      
 0.810
plpp-1.1
AcidPPc domain-containing protein.
      
 0.810
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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