STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srh-2Serpentine Receptor, class H. (342 aa)    
Predicted Functional Partners:
srj-1
Serpentine Receptor, class J.
      
 0.911
sra-3
Serpentine receptor class alpha-3.
      
 0.852
sre-2
Serpentine receptor class epsilon-2.
      
 0.851
sra-2
Serpentine receptor class alpha-2.
      
 0.850
sre-3
Serpentine Receptor, class E (Epsilon).
      
 0.807
sri-17
Serpentine Receptor, class I.
      
 0.806
sri-4
Serpentine Receptor, class I.
      
 0.759
sri-5
Serpentine Receptor, class I.
      
 0.758
sre-4
Serpentine Receptor, class E (Epsilon).
      
 0.758
sre-1
Serpentine receptor class epsilon-1.
      
 0.698
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.