Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Y48G1BL.8 | snpc-1.1 | Y48G1BL.8.1 | C06A8.2.1 | Uncharacterized protein. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.752 |
Y48G1BL.8 | snpc-3.1 | Y48G1BL.8.1 | B0273.3.1 | Uncharacterized protein. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.540 |
Y48G1BL.8 | snpc-3.2 | Y48G1BL.8.1 | Y48G1BM.1.1 | Uncharacterized protein. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.540 |
Y48G1BL.8 | snpc-3.4 | Y48G1BL.8.1 | T02C12.2.1 | Uncharacterized protein. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.540 |
Y48G1BL.8 | snpc-4 | Y48G1BL.8.1 | F32H2.1a.1 | Uncharacterized protein. | snRNA-activating protein complex subunit 4 homolog; Binds to the promoter regions of RNA polymerase II and III small-nuclear RNA genes, type 3 RNA polymerase III non-coding RNA genes, small nucleolar RNAs and transfer RNA genes. Required for expression of mature 21U-RNAs. | 0.869 |
Y48G1BL.8 | tbp-1 | Y48G1BL.8.1 | T20B12.2.1 | Uncharacterized protein. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.454 |
Y48G1BL.8 | ttb-1 | Y48G1BL.8.1 | W03F9.5.1 | Uncharacterized protein. | Transcription initiation factor IIB; General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.453 |
cpf-2 | mdt-26 | F56A8.6.2 | C25H3.6a.1 | RRM domain-containing protein. | TFIIS N-terminal domain-containing protein. | 0.745 |
cpf-2 | snpc-1.1 | F56A8.6.2 | C06A8.2.1 | RRM domain-containing protein. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.721 |
mdt-26 | cpf-2 | C25H3.6a.1 | F56A8.6.2 | TFIIS N-terminal domain-containing protein. | RRM domain-containing protein. | 0.745 |
mdt-26 | snpc-1.1 | C25H3.6a.1 | C06A8.2.1 | TFIIS N-terminal domain-containing protein. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.705 |
mdt-26 | tbp-1 | C25H3.6a.1 | T20B12.2.1 | TFIIS N-terminal domain-containing protein. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.775 |
mdt-26 | ttb-1 | C25H3.6a.1 | W03F9.5.1 | TFIIS N-terminal domain-containing protein. | Transcription initiation factor IIB; General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.918 |
snpc-1.1 | Y48G1BL.8 | C06A8.2.1 | Y48G1BL.8.1 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | Uncharacterized protein. | 0.752 |
snpc-1.1 | cpf-2 | C06A8.2.1 | F56A8.6.2 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | RRM domain-containing protein. | 0.721 |
snpc-1.1 | mdt-26 | C06A8.2.1 | C25H3.6a.1 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | TFIIS N-terminal domain-containing protein. | 0.705 |
snpc-1.1 | snpc-3.1 | C06A8.2.1 | B0273.3.1 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.978 |
snpc-1.1 | snpc-3.2 | C06A8.2.1 | Y48G1BM.1.1 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.956 |
snpc-1.1 | snpc-3.4 | C06A8.2.1 | T02C12.2.1 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | SNAPc (Small Nuclear RNA Activating Complex) homolog. | 0.907 |
snpc-1.1 | snpc-4 | C06A8.2.1 | F32H2.1a.1 | SNAPc (Small Nuclear RNA Activating Complex) homolog. | snRNA-activating protein complex subunit 4 homolog; Binds to the promoter regions of RNA polymerase II and III small-nuclear RNA genes, type 3 RNA polymerase III non-coding RNA genes, small nucleolar RNAs and transfer RNA genes. Required for expression of mature 21U-RNAs. | 0.986 |
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