Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| acr-15 | glr-4 | F25G6.4.1 | C06A8.9a.1 | AcetylCholine Receptor. | GLutamate Receptor family (AMPA). | 0.710 |
| acr-15 | glr-5 | F25G6.4.1 | ZC196.7.1 | AcetylCholine Receptor. | GLutamate Receptor family (AMPA). | 0.858 |
| acr-15 | ser-4 | F25G6.4.1 | Y22D7AR.13.2 | AcetylCholine Receptor. | G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. | 0.795 |
| acr-15 | trp-4 | F25G6.4.1 | Y71A12B.4.1 | AcetylCholine Receptor. | ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. | 0.736 |
| bnc-1 | cfi-1 | F55C5.11.1 | T23D8.8.1 | BasoNuClin-1 zinc finger protein homolog. | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | 0.695 |
| bnc-1 | del-1 | F55C5.11.1 | E02H4.1a.1 | BasoNuClin-1 zinc finger protein homolog. | Degenerin del-1; Probable sodium channel subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.430 |
| bnc-1 | glr-4 | F55C5.11.1 | C06A8.9a.1 | BasoNuClin-1 zinc finger protein homolog. | GLutamate Receptor family (AMPA). | 0.662 |
| bnc-1 | unc-3 | F55C5.11.1 | Y16B4A.1.1 | BasoNuClin-1 zinc finger protein homolog. | Transcription factor unc-3; May play a role in the expression of proteins essential for axonal pathfinding and/or neuronal differentiation in both sensory and motor neurons. Cooperates with jmjd-3.1 and wdr-5.1 to ensure robust transdifferentiation of the Y rectal cell to the PDA motor neuron during larval development. | 0.618 |
| cfi-1 | bnc-1 | T23D8.8.1 | F55C5.11.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | BasoNuClin-1 zinc finger protein homolog. | 0.695 |
| cfi-1 | cho-1 | T23D8.8.1 | C48D1.3.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | 0.616 |
| cfi-1 | glr-4 | T23D8.8.1 | C06A8.9a.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | GLutamate Receptor family (AMPA). | 0.742 |
| cfi-1 | unc-3 | T23D8.8.1 | Y16B4A.1.1 | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | Transcription factor unc-3; May play a role in the expression of proteins essential for axonal pathfinding and/or neuronal differentiation in both sensory and motor neurons. Cooperates with jmjd-3.1 and wdr-5.1 to ensure robust transdifferentiation of the Y rectal cell to the PDA motor neuron during larval development. | 0.817 |
| cho-1 | cfi-1 | C48D1.3.1 | T23D8.8.1 | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | AT-rich interactive domain-containing protein cfi-1; Transcription factor which regulates neuronal subtype identity. Promotes differentiation of URA sensory neurons and prevents them to express male-specific CEM features. Promotes differentiation of AVD and PVC interneurons and their glutamate receptor expression. | 0.616 |
| cho-1 | del-1 | C48D1.3.1 | E02H4.1a.1 | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | Degenerin del-1; Probable sodium channel subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.405 |
| cho-1 | glr-4 | C48D1.3.1 | C06A8.9a.1 | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | GLutamate Receptor family (AMPA). | 0.673 |
| cho-1 | glr-5 | C48D1.3.1 | ZC196.7.1 | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | GLutamate Receptor family (AMPA). | 0.717 |
| cho-1 | sra-36 | C48D1.3.1 | B0304.9.1 | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | Serpentine Receptor, class A (Alpha). | 0.463 |
| cho-1 | unc-3 | C48D1.3.1 | Y16B4A.1.1 | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | Transcription factor unc-3; May play a role in the expression of proteins essential for axonal pathfinding and/or neuronal differentiation in both sensory and motor neurons. Cooperates with jmjd-3.1 and wdr-5.1 to ensure robust transdifferentiation of the Y rectal cell to the PDA motor neuron during larval development. | 0.763 |
| del-1 | bnc-1 | E02H4.1a.1 | F55C5.11.1 | Degenerin del-1; Probable sodium channel subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | BasoNuClin-1 zinc finger protein homolog. | 0.430 |
| del-1 | cho-1 | E02H4.1a.1 | C48D1.3.1 | Degenerin del-1; Probable sodium channel subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | High-affinity choline transporter 1; Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent. | 0.405 |
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