STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C06B3.7Uncharacterized protein. (303 aa)    
Predicted Functional Partners:
F10A3.17
FTH domain-containing protein.
   
  
 0.905
best-7
Bestrophin homolog; Forms chloride channels; Belongs to the bestrophin family.
      
 0.808
fbxc-28
F-box C protein.
      
 0.807
vet-6
Very Early Transcript.
      
 0.758
dyf-3
Clusterin-associated protein 1 homolog; Component of the intraflagellar transport (IFT) complex B required for transport of proteins in the motile cilium. May be required for ciliary entrance and transport of specific ciliary cargo proteins such as che-3 which are related to motility. Required for sensory cilia biogenesis ; Belongs to the CLUAP1 family.
      
 0.741
haf-6
HAlF transporter (PGP related).
      
 0.697
irg-2
Infection Response protein.
   
   
0.592
C10C5.2
F-box C protein.
   
    0.566
F56D2.5
RBR-type E3 ubiquitin transferase.
   
    0.538
Y58A7A.3
Uncharacterized protein.
   
    0.532
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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