STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ztf-30Zinc finger transcription factor family protein 30. (397 aa)    
Predicted Functional Partners:
gop-1
Protein CLEC16A homolog; Regulator of mitophagy.
      
 0.862
nhr-177
NR LBD domain-containing protein.
    
 
 0.808
sym-4
SYM-4.
      
 0.807
nhr-232
Nuclear Hormone Receptor family.
    
 
 0.764
zip-6
BZIP domain-containing protein.
      
 0.740
tbx-39
Putative T-box protein 39.
      
 0.549
nhr-70
Nuclear Hormone Receptor family.
    
 
 0.545
tbx-40
Putative T-box protein 40.
      
 0.532
emb-4
Uncharacterized protein.
      
 0.436
zip-8
bZIP transcription factor 8.
   
 
 0.417
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.