STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C06G4.4Uncharacterized protein C06G4.4. (129 aa)    
Predicted Functional Partners:
mrp-8
Uncharacterized protein.
      
 0.852
mrp-7
Uncharacterized protein.
      
 0.678
mrp-1
Uncharacterized protein.
      
 0.613
abt-1
ABC transporter domain-containing protein.
   
  
 0.566
abt-5
ABC Transporter family.
   
  
 0.555
abt-2
ABC Transporter family.
      
 0.532
abt-4
ABC Transporter family.
      
 0.532
abt-6
ABC Transporter family.
   
  
 0.482
mrp-4
Uncharacterized protein.
      
 0.422
K06A5.3
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.408
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.