STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugt-60Putative UDP-glucuronosyltransferase ugt-60; Belongs to the UDP-glycosyltransferase family. (507 aa)    
Predicted Functional Partners:
R06C1.4
RRM domain-containing protein.
   
  
 0.705
Y51A2D.13
Uncharacterized protein.
      
 0.698
nhr-109
NR LBD domain-containing protein.
   
  
 0.676
F53B2.8
Uncharacterized protein.
      
 0.661
B0495.8
Uncharacterized protein B0495.8; Belongs to the Luc7 family.
      
 0.611
him-14
MutS protein homolog him-14; Required during the pachytene stage of meiotic prophase for the formation of crossovers between homologous chromosomes. Not needed for pairing or synapsis. May promote crossing over by interfering with Holliday junction branch migration. Has no apparent role in DNA mismatch repair.
      
 0.544
pqn-70
Prion-like-(Q/N-rich)-domain-bearing protein.
      
 0.532
lipl-4
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
   
  
 0.478
pho-11
Putative acid phosphatase 11.
      
 0.461
R08E5.3
Methyltranfer_dom domain-containing protein.
      
 0.459
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.