STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C07D8.6Aldo_ket_red domain-containing protein. (317 aa)    
Predicted Functional Partners:
C55A6.6
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.815
F20G2.1
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.815
F56A4.4
GST N-terminal domain-containing protein.
      
 0.758
C55A6.7
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.748
F25D1.5
Uncharacterized protein.
  
 
 0.732
dhs-8
DeHydrogenases, Short chain.
  
 
 0.729
dhs-23
DeHydrogenases, Short chain.
  
 
 0.729
F20G2.2
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.714
pges-2
ProstaGlandin E Synthase homolog.
   
  
 0.714
ugt-16
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
   
  
 0.673
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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