STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C07G1.7Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
F22B3.7
CW domain-containing protein.
   
  
 0.868
F15B9.10
Uncharacterized protein.
      
 0.813
K09E9.1
MFS domain-containing protein.
    
 
 0.811
R11F4.2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
    
 
 0.733
C25F9.9
Uncharacterized protein.
    
 
 0.731
C52D10.3
DUF4140 domain-containing protein.
    
 
 0.724
clec-184
C-type LECtin.
    
 
 0.724
clec-139
C-type LECtin.
    
 
 0.724
F31F7.1
N-acetyltransferase domain-containing protein.
    
 
 0.719
F49C12.10
Methyltransf_11 domain-containing protein.
   
 
 0.710
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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