Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Y55F3AR.2 | glrx-10 | Y55F3AR.2.1 | Y34D9A.6.1 | Thioredoxin domain-containing protein. | Glutaredoxin domain-containing protein. | 0.444 |
Y55F3AR.2 | glrx-22 | Y55F3AR.2.1 | C07G1.8.1 | Thioredoxin domain-containing protein. | Glutaredoxin domain-containing protein. | 0.616 |
Y55F3AR.2 | glrx-3 | Y55F3AR.2.1 | D2063.3a.1 | Thioredoxin domain-containing protein. | GLutaRedoXin. | 0.727 |
Y55F3AR.2 | glrx-5 | Y55F3AR.2.1 | Y49E10.2.1 | Thioredoxin domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.555 |
Y55F3AR.2 | gsr-1 | Y55F3AR.2.1 | C46F11.2a.1 | Thioredoxin domain-containing protein. | Glutathione reductase, mitochondrial; Maintains high levels of reduced glutathione in the cytosol. Involved in resistance to oxidative stress and starvation. Together with thioredoxin reductase txtr- 1, required for the reduction of disulfide groups in the cuticle during molting. | 0.501 |
Y55F3AR.2 | trx-2 | Y55F3AR.2.1 | B0024.9a.2 | Thioredoxin domain-containing protein. | Probable thioredoxin-2; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | 0.508 |
Y55F3AR.2 | trx-5 | Y55F3AR.2.1 | K02H11.6.1 | Thioredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.745 |
glrx-10 | Y55F3AR.2 | Y34D9A.6.1 | Y55F3AR.2.1 | Glutaredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.444 |
glrx-10 | glrx-22 | Y34D9A.6.1 | C07G1.8.1 | Glutaredoxin domain-containing protein. | Glutaredoxin domain-containing protein. | 0.758 |
glrx-10 | glrx-3 | Y34D9A.6.1 | D2063.3a.1 | Glutaredoxin domain-containing protein. | GLutaRedoXin. | 0.861 |
glrx-10 | glrx-5 | Y34D9A.6.1 | Y49E10.2.1 | Glutaredoxin domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.933 |
glrx-10 | gsr-1 | Y34D9A.6.1 | C46F11.2a.1 | Glutaredoxin domain-containing protein. | Glutathione reductase, mitochondrial; Maintains high levels of reduced glutathione in the cytosol. Involved in resistance to oxidative stress and starvation. Together with thioredoxin reductase txtr- 1, required for the reduction of disulfide groups in the cuticle during molting. | 0.828 |
glrx-10 | rnr-1 | Y34D9A.6.1 | T23G5.1.2 | Glutaredoxin domain-containing protein. | Ribonucleoside-diphosphate reductase large subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.924 |
glrx-10 | trx-2 | Y34D9A.6.1 | B0024.9a.2 | Glutaredoxin domain-containing protein. | Probable thioredoxin-2; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | 0.706 |
glrx-10 | trxr-1 | Y34D9A.6.1 | C06G3.7a.1 | Glutaredoxin domain-containing protein. | Thioredoxin reductase 1; Together with glutathione reductase gsr-1, required for the reduction of disulfide groups in the cuticle during molting. | 0.616 |
glrx-22 | Y55F3AR.2 | C07G1.8.1 | Y55F3AR.2.1 | Glutaredoxin domain-containing protein. | Thioredoxin domain-containing protein. | 0.616 |
glrx-22 | glrx-10 | C07G1.8.1 | Y34D9A.6.1 | Glutaredoxin domain-containing protein. | Glutaredoxin domain-containing protein. | 0.758 |
glrx-22 | glrx-3 | C07G1.8.1 | D2063.3a.1 | Glutaredoxin domain-containing protein. | GLutaRedoXin. | 0.857 |
glrx-22 | glrx-5 | C07G1.8.1 | Y49E10.2.1 | Glutaredoxin domain-containing protein. | Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily. | 0.892 |
glrx-22 | gsr-1 | C07G1.8.1 | C46F11.2a.1 | Glutaredoxin domain-containing protein. | Glutathione reductase, mitochondrial; Maintains high levels of reduced glutathione in the cytosol. Involved in resistance to oxidative stress and starvation. Together with thioredoxin reductase txtr- 1, required for the reduction of disulfide groups in the cuticle during molting. | 0.672 |
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