STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C08F1.10Uncharacterized protein. (288 aa)    
Predicted Functional Partners:
clec-196
C-type lectin domain-containing protein.
   
  
 0.957
T20G5.8
ShKT domain-containing protein.
      
 0.808
lfi-1
Lin-5 (Five) Interacting protein.
      
 0.807
C08F1.6
Uncharacterized protein.
   
   
0.615
Y82E9BR.17
Uncharacterized protein.
   
    0.608
atz-1
Uncharacterized protein.
   
    0.602
EEED8.15
Uncharacterized protein.
   
    0.592
ZK1053.4
Uncharacterized protein.
   
    0.592
clec-266
C-type lectin domain-containing protein.
   
    0.579
F36H5.4
Uncharacterized protein.
   
   
0.539
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.