Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
deb-1 | hsp-25 | ZC477.9d.1 | C09B8.6a.1 | Vinculin; Involved in cell adhesion. May be involved in the attachment of the actin-based microfilaments to the plasma membrane. Involved in ovulation. | SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. | 0.631 |
deb-1 | unc-23 | ZC477.9d.1 | H14N18.1a.1 | Vinculin; Involved in cell adhesion. May be involved in the attachment of the actin-based microfilaments to the plasma membrane. Involved in ovulation. | BAG domain-containing protein. | 0.452 |
dnj-24 | hsp-110 | W03A5.7.1 | C30C11.4.2 | J domain-containing protein. | Heat shock protein 110. | 0.891 |
dnj-24 | hsp-25 | W03A5.7.1 | C09B8.6a.1 | J domain-containing protein. | SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. | 0.743 |
dnj-24 | hsp-90 | W03A5.7.1 | C47E8.5.3 | J domain-containing protein. | Heat shock protein 90; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. By stabilizing the receptor-type guanylate cyclase daf-11 or another sig [...] | 0.681 |
dnj-24 | unc-23 | W03A5.7.1 | H14N18.1a.1 | J domain-containing protein. | BAG domain-containing protein. | 0.836 |
hsp-110 | dnj-24 | C30C11.4.2 | W03A5.7.1 | Heat shock protein 110. | J domain-containing protein. | 0.891 |
hsp-110 | hsp-16.11 | C30C11.4.2 | T27E4.2.1 | Heat shock protein 110. | Heat shock protein Hsp-16.1/Hsp-16.11. | 0.436 |
hsp-110 | hsp-16.48 | C30C11.4.2 | T27E4.3.1 | Heat shock protein 110. | Heat shock protein Hsp-16.48/Hsp-16.49; Belongs to the small heat shock protein (HSP20) family. | 0.420 |
hsp-110 | hsp-25 | C30C11.4.2 | C09B8.6a.1 | Heat shock protein 110. | SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. | 0.737 |
hsp-110 | hsp-90 | C30C11.4.2 | C47E8.5.3 | Heat shock protein 110. | Heat shock protein 90; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. By stabilizing the receptor-type guanylate cyclase daf-11 or another sig [...] | 0.948 |
hsp-110 | unc-23 | C30C11.4.2 | H14N18.1a.1 | Heat shock protein 110. | BAG domain-containing protein. | 0.974 |
hsp-16.11 | hsp-110 | T27E4.2.1 | C30C11.4.2 | Heat shock protein Hsp-16.1/Hsp-16.11. | Heat shock protein 110. | 0.436 |
hsp-16.11 | hsp-16.2 | T27E4.2.1 | Y46H3A.3a.1 | Heat shock protein Hsp-16.1/Hsp-16.11. | Heat shock protein Hsp-16.2; Belongs to the small heat shock protein (HSP20) family. | 0.572 |
hsp-16.11 | hsp-16.48 | T27E4.2.1 | T27E4.3.1 | Heat shock protein Hsp-16.1/Hsp-16.11. | Heat shock protein Hsp-16.48/Hsp-16.49; Belongs to the small heat shock protein (HSP20) family. | 0.942 |
hsp-16.11 | hsp-25 | T27E4.2.1 | C09B8.6a.1 | Heat shock protein Hsp-16.1/Hsp-16.11. | SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. | 0.685 |
hsp-16.11 | hsp-90 | T27E4.2.1 | C47E8.5.3 | Heat shock protein Hsp-16.1/Hsp-16.11. | Heat shock protein 90; Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co- chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. By stabilizing the receptor-type guanylate cyclase daf-11 or another sig [...] | 0.785 |
hsp-16.2 | hsp-16.11 | Y46H3A.3a.1 | T27E4.2.1 | Heat shock protein Hsp-16.2; Belongs to the small heat shock protein (HSP20) family. | Heat shock protein Hsp-16.1/Hsp-16.11. | 0.572 |
hsp-16.2 | hsp-16.48 | Y46H3A.3a.1 | T27E4.3.1 | Heat shock protein Hsp-16.2; Belongs to the small heat shock protein (HSP20) family. | Heat shock protein Hsp-16.48/Hsp-16.49; Belongs to the small heat shock protein (HSP20) family. | 0.582 |
hsp-16.2 | hsp-25 | Y46H3A.3a.1 | C09B8.6a.1 | Heat shock protein Hsp-16.2; Belongs to the small heat shock protein (HSP20) family. | SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. | 0.632 |
page 1 of 3