Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F10A3.1 | T02E1.7 | F10A3.1.1 | T02E1.7.1 | Uncharacterized protein. | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | 0.810 |
F10A3.1 | clc-1 | F10A3.1.1 | C09F12.1.1 | Uncharacterized protein. | CLaudin-like in Caenorhabditis. | 0.699 |
F10A3.1 | sedl-1 | F10A3.1.1 | W05H7.3.1 | Uncharacterized protein. | Probable trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. Required for the systemic spread of the RNAi response; Belongs to the TRAPP small subunits family. Sedlin subfamily. | 0.853 |
F52E1.5 | clc-1 | F52E1.5.2 | C09F12.1.1 | Uncharacterized protein. | CLaudin-like in Caenorhabditis. | 0.718 |
F52E1.5 | srh-100 | F52E1.5.2 | C46E10.10.1 | Uncharacterized protein. | Serpentine Receptor, class H. | 0.532 |
K10D6.2 | clc-1 | K10D6.2b.1 | C09F12.1.1 | Uncharacterized protein. | CLaudin-like in Caenorhabditis. | 0.549 |
T02E1.7 | F10A3.1 | T02E1.7.1 | F10A3.1.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | Uncharacterized protein. | 0.810 |
T02E1.7 | clc-1 | T02E1.7.1 | C09F12.1.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | CLaudin-like in Caenorhabditis. | 0.663 |
T02E1.7 | sedl-1 | T02E1.7.1 | W05H7.3.1 | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | Probable trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. Required for the systemic spread of the RNAi response; Belongs to the TRAPP small subunits family. Sedlin subfamily. | 0.850 |
clc-1 | F10A3.1 | C09F12.1.1 | F10A3.1.1 | CLaudin-like in Caenorhabditis. | Uncharacterized protein. | 0.699 |
clc-1 | F52E1.5 | C09F12.1.1 | F52E1.5.2 | CLaudin-like in Caenorhabditis. | Uncharacterized protein. | 0.718 |
clc-1 | K10D6.2 | C09F12.1.1 | K10D6.2b.1 | CLaudin-like in Caenorhabditis. | Uncharacterized protein. | 0.549 |
clc-1 | T02E1.7 | C09F12.1.1 | T02E1.7.1 | CLaudin-like in Caenorhabditis. | Uncharacterized protein T02E1.7; Belongs to the SURF4 family. | 0.663 |
clc-1 | clc-2 | C09F12.1.1 | C01C10.1.1 | CLaudin-like in Caenorhabditis. | Clc-like protein 2; Belongs to the Clc family. | 0.691 |
clc-1 | dct-17 | C09F12.1.1 | F35E12.7a.1 | CLaudin-like in Caenorhabditis. | CUB_2 domain-containing protein. | 0.620 |
clc-1 | hic-1 | C09F12.1.1 | T28B4.4.2 | CLaudin-like in Caenorhabditis. | Uncharacterized protein. | 0.708 |
clc-1 | lys-1 | C09F12.1.1 | Y22F5A.4.2 | CLaudin-like in Caenorhabditis. | Lysozyme-like protein 1; Involved in resistance to Gram-negative bacterium S.marcescens and to bacterium Gram-positive S.aureus infection. | 0.577 |
clc-1 | sedl-1 | C09F12.1.1 | W05H7.3.1 | CLaudin-like in Caenorhabditis. | Probable trafficking protein particle complex subunit 2; May play a role in vesicular transport from endoplasmic reticulum to Golgi. Required for the systemic spread of the RNAi response; Belongs to the TRAPP small subunits family. Sedlin subfamily. | 0.700 |
clc-1 | srh-100 | C09F12.1.1 | C46E10.10.1 | CLaudin-like in Caenorhabditis. | Serpentine Receptor, class H. | 0.700 |
clc-2 | clc-1 | C01C10.1.1 | C09F12.1.1 | Clc-like protein 2; Belongs to the Clc family. | CLaudin-like in Caenorhabditis. | 0.691 |
page 1 of 2