C09F9.2 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C09F9.2

Uncharacterized protein. (1642 aa)

Predicted Functional Partners:

dpy-6

0.679

Y55F3BL.4

0.651

mrpl-23

0.617

mrps-18C

0.611

dpy-1

0.601

mrpl-16

0.571

mrps-15

0.564

mrpl-19

0.560

mrpl-41

0.558

mrpl-22

0.558

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C09F9.2	Y55F3BL.4	C09F9.2.1	Y55F3BL.4.1	Uncharacterized protein.	SRR1 domain-containing protein.	0.651
C09F9.2	dpy-1	C09F9.2.1	M01E10.2a.1	Uncharacterized protein.	DumPY: shorter than wild-type.	0.601
C09F9.2	dpy-6	C09F9.2.1	F16F9.2.1	Uncharacterized protein.	DumPY: shorter than wild-type.	0.679
C09F9.2	mrpl-16	C09F9.2.1	T04A8.11.1	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.571
C09F9.2	mrpl-19	C09F9.2.1	Y119C1B.4.1	Uncharacterized protein.	Probable 39S ribosomal protein L19, mitochondrial.	0.560
C09F9.2	mrpl-22	C09F9.2.1	Y39A1A.6.1	Uncharacterized protein.	Mitochondrial Ribosomal Protein, Large; Belongs to the universal ribosomal protein uL22 family.	0.558
C09F9.2	mrpl-23	C09F9.2.1	T08B2.8.1	Uncharacterized protein.	Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.	0.617
C09F9.2	mrpl-41	C09F9.2.1	B0432.3.1	Uncharacterized protein.	39S ribosomal protein L41, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL41 family.	0.558
C09F9.2	mrps-15	C09F9.2.1	K07A12.7.1	Uncharacterized protein.	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.	0.564
C09F9.2	mrps-18C	C09F9.2.1	C26E6.6.1	Uncharacterized protein.	Putative 39S ribosomal protein L3, mitochondrial.	0.611
Y55F3BL.4	C09F9.2	Y55F3BL.4.1	C09F9.2.1	SRR1 domain-containing protein.	Uncharacterized protein.	0.651
Y55F3BL.4	mrpl-16	Y55F3BL.4.1	T04A8.11.1	SRR1 domain-containing protein.	Ribosomal_L16 domain-containing protein.	0.996
Y55F3BL.4	mrpl-19	Y55F3BL.4.1	Y119C1B.4.1	SRR1 domain-containing protein.	Probable 39S ribosomal protein L19, mitochondrial.	0.990
Y55F3BL.4	mrpl-22	Y55F3BL.4.1	Y39A1A.6.1	SRR1 domain-containing protein.	Mitochondrial Ribosomal Protein, Large; Belongs to the universal ribosomal protein uL22 family.	0.995
Y55F3BL.4	mrpl-23	Y55F3BL.4.1	T08B2.8.1	SRR1 domain-containing protein.	Probable 39S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL23 family.	0.993
Y55F3BL.4	mrpl-41	Y55F3BL.4.1	B0432.3.1	SRR1 domain-containing protein.	39S ribosomal protein L41, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL41 family.	0.990
Y55F3BL.4	mrps-15	Y55F3BL.4.1	K07A12.7.1	SRR1 domain-containing protein.	28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.	0.995
Y55F3BL.4	mrps-18C	Y55F3BL.4.1	C26E6.6.1	SRR1 domain-containing protein.	Putative 39S ribosomal protein L3, mitochondrial.	0.992
dpy-1	C09F9.2	M01E10.2a.1	C09F9.2.1	DumPY: shorter than wild-type.	Uncharacterized protein.	0.601
dpy-6	C09F9.2	F16F9.2.1	C09F9.2.1	DumPY: shorter than wild-type.	Uncharacterized protein.	0.679