STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C09H10.5Uncharacterized protein. (158 aa)    
Predicted Functional Partners:
Y39E4B.10
Uncharacterized protein.
   
    0.591
Y53F4B.13
Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1; S-adenosyl-L-methionine-dependent methyltransferase that mediates mRNA cap1 2'-O-ribose methylation to the 5'-cap structure of mRNAs. Methylates the ribose of the first nucleotide of a m(7)GpppG- capped mRNA to produce m(7)GpppNmp (cap1). Cap1 modification is linked to higher levels of translation.
   
    0.559
Y104H12D.2
Uncharacterized protein.
   
    0.555
Y75B8A.8
Uncharacterized protein.
   
    0.552
C15C6.3
Uncharacterized protein.
   
    0.551
K11H12.9
Protein kinase domain-containing protein.
   
    0.551
tbx-8
T-box transcription factor tbx-8; Involved in the control of early morphogenesis of the intestine, hypodermis and body-wall muscle. Appears to have partially redundant function to tbx-9.
   
    0.551
mbtr-1
Malignant brain tumor repeat protein 1.
   
    0.550
Y67D8C.6
Uncharacterized protein.
   
    0.546
cogc-3
Conserved Oligomeric Golgi (COG) Component.
   
    0.546
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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