STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
str-131Seven TM Receptor. (335 aa)    
Predicted Functional Partners:
Y70D2A.1
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.895
F23F1.2
Uncharacterized protein.
   
  
 0.894
B0334.6
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.892
srz-78
Serpentine Receptor, class Z.
   
  
 0.892
lgc-21
Neur_chan_LBD domain-containing protein.
      
 0.892
H10E21.4
Uncharacterized protein.
      
 0.892
lgc-18
Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.892
Y12A6A.1
Uncharacterized protein.
      
 0.882
lgc-31
Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.809
dpf-6
Dipeptidyl peptidase family member 6; Removes N-terminal dipeptides sequentially from polypeptides (By similarity). Essential for control of distal tip cell migration.
      
 0.809
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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