STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pnk-1PaNtothenate Kinase. (449 aa)    
Predicted Functional Partners:
F25H9.6
Flavoprotein domain-containing protein.
     
 0.889
Y71H2AM.6
Uncharacterized protein.
     
 0.889
T05G5.5
Uncharacterized protein T05G5.5; Belongs to the CoaE family.
    
 
 0.823
T14G10.5
Probable coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity).
 
      0.764
F41D9.2
DOMON domain-containing protein.
      
 0.690
Y73B6BL.31
TPT domain-containing protein.
      
 0.690
F25B5.3
Putative cytosolic 5'-nucleotidase 3.
   
  
 0.675
Y106G6H.6
Uncharacterized protein.
   
  
 0.667
Y17G7B.18
Probable RNA methyltransferase Y17G7B.18; Probable RNA methyltransferase; Belongs to the methyltransferase superfamily.
   
  
 0.667
ttc-36
Tetratricopeptide repeat protein 36; Belongs to the TTC36 family.
      
 0.660
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.