STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11D2.7PUA domain-containing protein. (185 aa)    
Predicted Functional Partners:
Y47D3A.21
Density-regulated protein homolog; Belongs to the DENR family.
   
 
 0.989
eif-1
SUI1 domain-containing protein.
   
 
 0.936
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.891
C48B6.2
Putative 40S ribosomal protein S4-like.
   
 
 0.859
C15C6.4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
  
 0.818
T03G11.3
Zinc finger C2HC domain-containing protein T03G11.3; Belongs to the ZC2HC1 family.
      
 0.807
Y82E9BR.19
F-box domain-containing protein.
      
 0.807
R11H6.5
Uncharacterized protein.
      
 0.760
Y60A9.3
Uncharacterized protein.
      
 0.760
rop-1
60 kDa SS-A/Ro ribonucleoprotein homolog; RNA-binding protein that binds to a single small cytoplasmic RNA molecule known as Y RNA. May stabilize this RNA from degradation; Belongs to the Ro 60 kDa family.
      
 0.759
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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