STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11G6.2ATP-dependent DNA helicase; Belongs to the helicase family. (169 aa)    
Predicted Functional Partners:
Y108F1.5
HA2 domain-containing protein.
      
 0.809
snrp-200
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase; Putative RNA helicase involved in the second step of RNA splicing; Belongs to the helicase family. SKI2 subfamily.
   
 
 0.767
ddx-35
Probable ATP-dependent RNA helicase DHX35 homolog.
      
 0.751
F53H1.1
Uncharacterized protein.
  
  
 0.746
F57B9.3
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
  
 0.714
F33D11.10
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
  
 0.676
Y65B4A.6
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
  
 0.676
snf-2
Transporter.
      
 0.666
Y46B2A.2
ATP-dependent DNA helicase; Belongs to the helicase family.
  
   
 0.558
F59H6.5
ATP-dependent DNA helicase; Belongs to the helicase family.
  
   
 0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (26%) [HD]