nhr-94 protein (Caenorhabditis elegans) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

nhr-94

NR LBD domain-containing protein. (338 aa)

Predicted Functional Partners:

F19F10.1

0.541

ets-7

0.535

ets-8

0.534

nhr-197

0.533

nhr-281

0.530

nhr-192

0.530

nhr-52

0.530

nhr-113

0.530

nhr-171

0.529

nhr-268

0.529

Your Current Organism:

Caenorhabditis elegans

NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F19F10.1	ets-7	F19F10.1.2	F19F10.5.1	ETS domain-containing protein.	ETS domain-containing protein.	0.478
F19F10.1	ets-8	F19F10.1.2	C50A2.4.2	ETS domain-containing protein.	ETS domain-containing protein.	0.417
F19F10.1	nhr-113	F19F10.1.2	ZK1025.9.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.548
F19F10.1	nhr-171	F19F10.1.2	C54F6.8.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.547
F19F10.1	nhr-192	F19F10.1.2	F57A8.5.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.557
F19F10.1	nhr-197	F19F10.1.2	K06B4.7.1	ETS domain-containing protein.	Nuclear hormone receptor family member nhr-197; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.	0.548
F19F10.1	nhr-268	F19F10.1.2	K06B4.6.2	ETS domain-containing protein.	Nuclear hormone receptor family member nhr-268; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.	0.536
F19F10.1	nhr-281	F19F10.1.2	F16B12.8.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.549
F19F10.1	nhr-52	F19F10.1.2	K06B4.2.1	ETS domain-containing protein.	Nuclear hormone receptor family member nhr-52; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.	0.548
F19F10.1	nhr-94	F19F10.1.2	C12D5.8a.1	ETS domain-containing protein.	NR LBD domain-containing protein.	0.541
ets-7	F19F10.1	F19F10.5.1	F19F10.1.2	ETS domain-containing protein.	ETS domain-containing protein.	0.478
ets-7	nhr-113	F19F10.5.1	ZK1025.9.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.548
ets-7	nhr-171	F19F10.5.1	C54F6.8.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.546
ets-7	nhr-192	F19F10.5.1	F57A8.5.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.560
ets-7	nhr-197	F19F10.5.1	K06B4.7.1	ETS domain-containing protein.	Nuclear hormone receptor family member nhr-197; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.	0.548
ets-7	nhr-268	F19F10.5.1	K06B4.6.2	ETS domain-containing protein.	Nuclear hormone receptor family member nhr-268; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.	0.536
ets-7	nhr-281	F19F10.5.1	F16B12.8.1	ETS domain-containing protein.	Nuclear Hormone Receptor family.	0.548
ets-7	nhr-52	F19F10.5.1	K06B4.2.1	ETS domain-containing protein.	Nuclear hormone receptor family member nhr-52; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.	0.547
ets-7	nhr-94	F19F10.5.1	C12D5.8a.1	ETS domain-containing protein.	NR LBD domain-containing protein.	0.535
ets-8	F19F10.1	C50A2.4.2	F19F10.1.2	ETS domain-containing protein.	ETS domain-containing protein.	0.417