STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttr-19TransThyretin-Related family domain. (143 aa)    
Predicted Functional Partners:
F58F6.6
Uncharacterized protein.
   
    0.592
F45E6.1
Uncharacterized protein.
   
    0.562
srx-54
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.562
srd-45
Serpentine receptor class delta-45.
   
    0.556
Y116A8C.11
Uncharacterized protein Y116A8C.11.
   
    0.556
sra-1
Serpentine receptor class alpha-1.
   
    0.554
kin-6
Non-specific protein-tyrosine kinase.
   
    0.554
srbc-2
Serpentine Receptor, class BC (Class B-like).
   
    0.552
srsx-2
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.552
srh-148
Serpentine Receptor, class H.
   
    0.552
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.