STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C13A10.2Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
lgc-38
Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
    0.593
nhr-184
Nuclear Hormone Receptor family.
   
    0.592
clec-89
C-type LECtin.
   
    0.588
F09F7.5
CRIB domain-containing protein.
   
    0.584
crp-1
Cdc-42 Related Protein.
   
    0.576
C01F1.4
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.571
Y9C9A.1
Uncharacterized protein.
   
    0.571
nhr-54
Nuclear hormone receptor family member nhr-54; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
   
    0.566
Y57G11C.22
Uncharacterized protein.
   
    0.566
C31H5.1
Uncharacterized protein.
   
    0.564
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.