STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spin-1MFS domain-containing protein. (531 aa)    
Predicted Functional Partners:
cft-1
Cystic Fibrosis Transmembrane conductance regulator homolog.
   
 
 0.495
C56E10.3
Uncharacterized protein.
    
 
 0.488
K08C7.1
Uncharacterized protein.
   
  
 0.480
Y71F9AL.10
RING-type domain-containing protein.
    
 
 0.480
srab-25
Serpentine Receptor, class AB (Class A-like).
  
  
 0.479
srab-21
Serpentine Receptor, class AB (Class A-like).
  
  
 0.477
chtl-1
Choline transporter-like protein 1; Belongs to the CTL (choline transporter-like) family.
      
 0.474
ari-2
Potential E3 ubiquitin-protein ligase ariadne-2; Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, such as UBC-2/UBE2L3, and then transfers it to substrates. Belongs to the RBR family. Ariadne subfamily.
      
 0.470
str-116
Seven TM Receptor.
   
  
 0.468
str-129
Seven TM Receptor.
   
  
 0.468
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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