STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkb-8Fe2OG dioxygenase domain-containing protein. (591 aa)    
Predicted Functional Partners:
C04H5.1
Multifunctional methyltransferase subunit TRM112-like protein; Acts as an activator of both RNA and protein methyltransferases.
   
 
 0.996
spat-1
Suppressor of PAr-Two defect.
   
 
 0.965
alkb-7
2OG-FeII_Oxy_2 domain-containing protein.
   
  
 0.924
R09A1.2
BTB domain-containing protein.
    
 
 0.915
B0554.1
Uncharacterized protein.
      
 0.910
C03H5.5
Uncharacterized protein.
      
 0.910
C49A1.1
Uncharacterized protein.
      
 0.910
msrp-1
MS Related Protein.
      
 0.910
F36H12.3
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
      
 0.910
Y51H7C.1
Uncharacterized protein.
   
 
 0.859
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (18%) [HD]