Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C04E6.11 | mma-1 | C04E6.11.1 | C14C10.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.932 |
F02A9.10 | mma-1 | F02A9.10.1 | C14C10.4.1 | Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism; Belongs to the AccD/PCCB family. | Uncharacterized protein. | 0.631 |
F02A9.10 | mrps-18C | F02A9.10.1 | C26E6.6.1 | Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism; Belongs to the AccD/PCCB family. | Putative 39S ribosomal protein L3, mitochondrial. | 0.425 |
F02A9.10 | pccb-1 | F02A9.10.1 | F52E4.1a.2 | Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism; Belongs to the AccD/PCCB family. | Propionyl Coenzyme A Carboxylase Beta subunit. | 0.587 |
F46B6.6 | dap-3 | F46B6.6a.1 | C14A4.2.1 | Tr-type G domain-containing protein. | Mammalian cell Death Associated Protein related. | 0.900 |
F46B6.6 | mma-1 | F46B6.6a.1 | C14C10.4.1 | Tr-type G domain-containing protein. | Uncharacterized protein. | 0.614 |
F46B6.6 | mrps-18C | F46B6.6a.1 | C26E6.6.1 | Tr-type G domain-containing protein. | Putative 39S ribosomal protein L3, mitochondrial. | 0.923 |
F46B6.6 | pcn-1 | F46B6.6a.1 | W03D2.4.1 | Tr-type G domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.510 |
F46B6.6 | rps-11 | F46B6.6a.1 | F40F11.1.1 | Tr-type G domain-containing protein. | Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. | 0.962 |
acbp-1 | mma-1 | C44E4.6.3 | C14C10.4.1 | Acyl-CoA-binding protein homolog 1; Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. | Uncharacterized protein. | 0.660 |
dap-3 | F46B6.6 | C14A4.2.1 | F46B6.6a.1 | Mammalian cell Death Associated Protein related. | Tr-type G domain-containing protein. | 0.900 |
dap-3 | mma-1 | C14A4.2.1 | C14C10.4.1 | Mammalian cell Death Associated Protein related. | Uncharacterized protein. | 0.666 |
dap-3 | mrps-18C | C14A4.2.1 | C26E6.6.1 | Mammalian cell Death Associated Protein related. | Putative 39S ribosomal protein L3, mitochondrial. | 0.995 |
dap-3 | rps-11 | C14A4.2.1 | F40F11.1.1 | Mammalian cell Death Associated Protein related. | Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. | 0.986 |
gip-1 | mma-1 | H04J21.3b.1 | C14C10.4.1 | Gamma-tubulin complex component. | Uncharacterized protein. | 0.743 |
mma-1 | C04E6.11 | C14C10.4.1 | C04E6.11.1 | Uncharacterized protein. | Uncharacterized protein. | 0.932 |
mma-1 | F02A9.10 | C14C10.4.1 | F02A9.10.1 | Uncharacterized protein. | Probable methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; Carboxyltransferase subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism; Belongs to the AccD/PCCB family. | 0.631 |
mma-1 | F46B6.6 | C14C10.4.1 | F46B6.6a.1 | Uncharacterized protein. | Tr-type G domain-containing protein. | 0.614 |
mma-1 | acbp-1 | C14C10.4.1 | C44E4.6.3 | Uncharacterized protein. | Acyl-CoA-binding protein homolog 1; Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. | 0.660 |
mma-1 | dap-3 | C14C10.4.1 | C14A4.2.1 | Uncharacterized protein. | Mammalian cell Death Associated Protein related. | 0.666 |
page 1 of 3