STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zipt-13Zrt (ZRT), Irt-(IRT-) like Protein Transporter. (353 aa)    
Predicted Functional Partners:
Y105E8A.3
SLC (SoLute Carrier) homolog.
   
 
 0.887
zipt-1
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
   
 
 0.857
zipt-2.3
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
   
 
 0.776
nlp-26
Neuropeptide-Like Protein.
   
  
 0.700
fip-1
Fungus-induced protein 1.
      
 0.697
comt-3
Catechol-O-MethylTransferase family.
   
  
 0.697
fipr-26
FIP (Fungus-Induced Protein) Related.
      
 0.693
ddx-52
DEAD boX helicase homolog.
      
 0.669
cdr-4
Cadmium-inducible lysosomal protein CDR-4.
   
  
 0.667
zipt-9
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
    
 
 0.665
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.