STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdf-1Cation diffusion facilitator family protein 1; Involved in the regulation of Pn.p cell fate determination. Involved in zinc metabolism and the decrease of the cytosolic zinc concentration which is thought to modulate Ras signaling. Involved in zinc transport from the intestinal lumen to the pseudocoelum. (561 aa)    
Predicted Functional Partners:
sur-7
SUppressor of activated let-60 Ras.
   
  
 0.924
haly-1
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
  
 0.828
zipt-2.3
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
   
 
 0.779
zipt-15
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
   
 
 0.753
natc-1
N-alpha-AcetylTransferase C complex subunit.
   
  
 0.692
cua-1
Copper transporting ATPase.
  
  
 0.690
zipt-7.2
Zinc transporter zipt-7.2; Zinc transporter.
  
 
 0.641
zipt-13
Zrt (ZRT), Irt-(IRT-) like Protein Transporter.
   
 
 0.605
mtl-1
Metallothionein-1; This protein binds cations of several transition elements.
      
 0.597
mtl-2
Metallothionein-2; This protein binds cations of several transition elements.
      
 0.597
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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