Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| M28.5 | Y23H5B.5 | M28.5.1 | Y23H5B.5.1 | NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family. | WD_REPEATS_REGION domain-containing protein. | 0.996 |
| M28.5 | Y54E5B.2 | M28.5.1 | Y54E5B.2.1 | NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family. | WD_REPEATS_REGION domain-containing protein. | 0.923 |
| M28.5 | cky-1 | M28.5.1 | C15C8.2.1 | NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family. | BHLH-PAS factor. | 0.681 |
| Y23H5B.5 | M28.5 | Y23H5B.5.1 | M28.5.1 | WD_REPEATS_REGION domain-containing protein. | NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family. | 0.996 |
| Y23H5B.5 | Y54E5B.2 | Y23H5B.5.1 | Y54E5B.2.1 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.886 |
| Y23H5B.5 | cky-1 | Y23H5B.5.1 | C15C8.2.1 | WD_REPEATS_REGION domain-containing protein. | BHLH-PAS factor. | 0.701 |
| Y54E5B.2 | M28.5 | Y54E5B.2.1 | M28.5.1 | WD_REPEATS_REGION domain-containing protein. | NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family. | 0.923 |
| Y54E5B.2 | Y23H5B.5 | Y54E5B.2.1 | Y23H5B.5.1 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.886 |
| Y54E5B.2 | cky-1 | Y54E5B.2.1 | C15C8.2.1 | WD_REPEATS_REGION domain-containing protein. | BHLH-PAS factor. | 0.697 |
| aha-1 | cky-1 | C25A1.11a.1 | C15C8.2.1 | Aryl hydrocarbon receptor nuclear translocator homolog; Has a role in cellular differentiation. Required for pharyngeal development. In collaboration with ahr-1 it is involved in RMEL/R and SDQR neuron cell migration. Acts in the cellular response to hypoxia. Involved in aggregation behavior by regulating soluble guanylate cyclase gene expression in the URX neurons. | BHLH-PAS factor. | 0.999 |
| aha-1 | hlh-34 | C25A1.11a.1 | T01D3.2.1 | Aryl hydrocarbon receptor nuclear translocator homolog; Has a role in cellular differentiation. Required for pharyngeal development. In collaboration with ahr-1 it is involved in RMEL/R and SDQR neuron cell migration. Acts in the cellular response to hypoxia. Involved in aggregation behavior by regulating soluble guanylate cyclase gene expression in the URX neurons. | Helix-loop-helix 34; Transcription factor that may be a master gene of CNS development in cooperation with Arnt. It may have pleiotropic effects in the tissues expressed during development (By similarity). | 0.966 |
| cky-1 | M28.5 | C15C8.2.1 | M28.5.1 | BHLH-PAS factor. | NHP2-like protein 1 homolog; Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding (By similarity); Belongs to the eukaryotic ribosomal protein eL8 family. | 0.681 |
| cky-1 | Y23H5B.5 | C15C8.2.1 | Y23H5B.5.1 | BHLH-PAS factor. | WD_REPEATS_REGION domain-containing protein. | 0.701 |
| cky-1 | Y54E5B.2 | C15C8.2.1 | Y54E5B.2.1 | BHLH-PAS factor. | WD_REPEATS_REGION domain-containing protein. | 0.697 |
| cky-1 | aha-1 | C15C8.2.1 | C25A1.11a.1 | BHLH-PAS factor. | Aryl hydrocarbon receptor nuclear translocator homolog; Has a role in cellular differentiation. Required for pharyngeal development. In collaboration with ahr-1 it is involved in RMEL/R and SDQR neuron cell migration. Acts in the cellular response to hypoxia. Involved in aggregation behavior by regulating soluble guanylate cyclase gene expression in the URX neurons. | 0.999 |
| cky-1 | hlh-34 | C15C8.2.1 | T01D3.2.1 | BHLH-PAS factor. | Helix-loop-helix 34; Transcription factor that may be a master gene of CNS development in cooperation with Arnt. It may have pleiotropic effects in the tissues expressed during development (By similarity). | 0.816 |
| cky-1 | nhr-116 | C15C8.2.1 | F09C6.9.1 | BHLH-PAS factor. | Nuclear Hormone Receptor family. | 0.699 |
| cky-1 | nhr-127 | C15C8.2.1 | T13F3.3.1 | BHLH-PAS factor. | Nuclear hormone receptor family member nhr-127; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family. | 0.853 |
| cky-1 | nhr-19 | C15C8.2.1 | E02H1.7.1 | BHLH-PAS factor. | Nuclear hormone receptor family member nhr-19; Orphan nuclear receptor. | 0.806 |
| cky-1 | nhr-99 | C15C8.2.1 | M02H5.1.1 | BHLH-PAS factor. | Nuclear Hormone Receptor family. | 0.807 |
page 1 of 2