Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dog-1 | fncm-1 | F33H2.1.1 | F56A3.1.1 | Helicase ATP-binding domain-containing protein. | FANCM (Fanconi anemia complex component M) homolog. | 0.816 |
| dog-1 | polk-1 | F33H2.1.1 | F22B7.6a.1 | Helicase ATP-binding domain-containing protein. | DNA polymerase kappa; DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts. Lacks 3'-5' proofreading exonuclease activity. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity (By similarity). Belongs to the DNA polymerase type-Y family. | 0.857 |
| dog-1 | rad-51 | F33H2.1.1 | Y43C5A.6a.1 | Helicase ATP-binding domain-containing protein. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. | 0.803 |
| dog-1 | rcq-5 | F33H2.1.1 | E03A3.2.1 | Helicase ATP-binding domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.791 |
| dog-1 | smrc-1 | F33H2.1.1 | C16A3.1c.1 | Helicase ATP-binding domain-containing protein. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; ATP-dependent annealing helicase that catalyzes the rewinding of the stably unwound DNA. | 0.745 |
| dog-1 | sws-1 | F33H2.1.1 | Y39B6A.40a.1 | Helicase ATP-binding domain-containing protein. | SWIM-type domain-containing protein. | 0.686 |
| dog-1 | xpf-1 | F33H2.1.1 | C47D12.8.1 | Helicase ATP-binding domain-containing protein. | ERCC4 domain-containing protein. | 0.866 |
| fncm-1 | dog-1 | F56A3.1.1 | F33H2.1.1 | FANCM (Fanconi anemia complex component M) homolog. | Helicase ATP-binding domain-containing protein. | 0.816 |
| fncm-1 | polk-1 | F56A3.1.1 | F22B7.6a.1 | FANCM (Fanconi anemia complex component M) homolog. | DNA polymerase kappa; DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts. Lacks 3'-5' proofreading exonuclease activity. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity (By similarity). Belongs to the DNA polymerase type-Y family. | 0.705 |
| fncm-1 | rcq-5 | F56A3.1.1 | E03A3.2.1 | FANCM (Fanconi anemia complex component M) homolog. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.555 |
| fncm-1 | smrc-1 | F56A3.1.1 | C16A3.1c.1 | FANCM (Fanconi anemia complex component M) homolog. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; ATP-dependent annealing helicase that catalyzes the rewinding of the stably unwound DNA. | 0.681 |
| pcn-1 | polk-1 | W03D2.4.1 | F22B7.6a.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | DNA polymerase kappa; DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts. Lacks 3'-5' proofreading exonuclease activity. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity (By similarity). Belongs to the DNA polymerase type-Y family. | 0.968 |
| pcn-1 | rad-51 | W03D2.4.1 | Y43C5A.6a.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. | 0.944 |
| pcn-1 | rcq-5 | W03D2.4.1 | E03A3.2.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.613 |
| pcn-1 | rpa-1 | W03D2.4.1 | F18A1.5.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | Probable replication factor A 73 kDa subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. | 0.853 |
| pcn-1 | smrc-1 | W03D2.4.1 | C16A3.1c.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1; ATP-dependent annealing helicase that catalyzes the rewinding of the stably unwound DNA. | 0.790 |
| pcn-1 | sws-1 | W03D2.4.1 | Y39B6A.40a.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | SWIM-type domain-containing protein. | 0.464 |
| pcn-1 | xpf-1 | W03D2.4.1 | C47D12.8.1 | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | ERCC4 domain-containing protein. | 0.721 |
| polk-1 | dog-1 | F22B7.6a.1 | F33H2.1.1 | DNA polymerase kappa; DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts. Lacks 3'-5' proofreading exonuclease activity. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity (By similarity). Belongs to the DNA polymerase type-Y family. | Helicase ATP-binding domain-containing protein. | 0.857 |
| polk-1 | fncm-1 | F22B7.6a.1 | F56A3.1.1 | DNA polymerase kappa; DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high-fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Depending on the context, it inserts the correct base, but causes frequent base transitions, transversions and frameshifts. Lacks 3'-5' proofreading exonuclease activity. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity (By similarity). Belongs to the DNA polymerase type-Y family. | FANCM (Fanconi anemia complex component M) homolog. | 0.705 |
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