Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C16C10.1 | F39H2.3 | C16C10.1.1 | F39H2.3.2 | Uncharacterized mitochondrial carrier C16C10.1. | GCV_T domain-containing protein. | 0.415 |
C16C10.1 | Y39B6A.3 | C16C10.1.1 | Y39B6A.3b.1 | Uncharacterized mitochondrial carrier C16C10.1. | Fe-S_biosyn domain-containing protein. | 0.553 |
C16C10.1 | Y55F3AR.2 | C16C10.1.1 | Y55F3AR.2.1 | Uncharacterized mitochondrial carrier C16C10.1. | Thioredoxin domain-containing protein. | 0.507 |
C16C10.1 | abtm-1 | C16C10.1.1 | Y74C10AR.3a.1 | Uncharacterized mitochondrial carrier C16C10.1. | ABC Transporter, Mitochondrial. | 0.483 |
C16C10.1 | lars-1 | C16C10.1.1 | R74.1.1 | Uncharacterized mitochondrial carrier C16C10.1. | Leucine--tRNA ligase; Involved in protein synthesis. Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA. | 0.629 |
C16C10.1 | mfn-1 | C16C10.1.1 | W02B12.9.1 | Uncharacterized mitochondrial carrier C16C10.1. | Mitoferrin; Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.432 |
C16C10.1 | mspn-1 | C16C10.1.1 | K04D7.2a.1 | Uncharacterized mitochondrial carrier C16C10.1. | Mitochondrial sorting homolog; Involved in intramitochondrial sorting of proteins. | 0.425 |
C16C10.1 | mtm-6 | C16C10.1.1 | F53A2.8b.2 | Uncharacterized mitochondrial carrier C16C10.1. | Myotubularin-related protein 6; May dephosphorylate phosphatidylinositol-3-phosphate (PI3P). In association with mtm-9, plays a role in endosome trafficking probably by regulating phosphatidylinositol-3-phosphate levels. Regulates fluid phase endocytosis in coelomocytes. Controls the endosomal localization of sorting nexin snx-3 and the levels of sorting receptor mig-14. By regulating the retrograde transport of mig-14, may be involved in the secretion of Wnt ligands such as egl-20. Regulates posterior migration of QL neuroblast descendants and the anterior migration of QR neuroblast d [...] | 0.430 |
C16C10.1 | tbc-12 | C16C10.1.1 | R11B5.1.1 | Uncharacterized mitochondrial carrier C16C10.1. | Rab-GAP TBC domain-containing protein. | 0.408 |
C16C10.1 | txl-1 | C16C10.1.1 | Y54E10A.3.1 | Uncharacterized mitochondrial carrier C16C10.1. | Thioredoxin-like protein TXL. | 0.585 |
F39H2.3 | C16C10.1 | F39H2.3.2 | C16C10.1.1 | GCV_T domain-containing protein. | Uncharacterized mitochondrial carrier C16C10.1. | 0.415 |
F39H2.3 | Y39B6A.3 | F39H2.3.2 | Y39B6A.3b.1 | GCV_T domain-containing protein. | Fe-S_biosyn domain-containing protein. | 0.808 |
F39H2.3 | abtm-1 | F39H2.3.2 | Y74C10AR.3a.1 | GCV_T domain-containing protein. | ABC Transporter, Mitochondrial. | 0.666 |
F39H2.3 | mfn-1 | F39H2.3.2 | W02B12.9.1 | GCV_T domain-containing protein. | Mitoferrin; Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.402 |
Y39B6A.3 | C16C10.1 | Y39B6A.3b.1 | C16C10.1.1 | Fe-S_biosyn domain-containing protein. | Uncharacterized mitochondrial carrier C16C10.1. | 0.553 |
Y39B6A.3 | F39H2.3 | Y39B6A.3b.1 | F39H2.3.2 | Fe-S_biosyn domain-containing protein. | GCV_T domain-containing protein. | 0.808 |
Y39B6A.3 | abtm-1 | Y39B6A.3b.1 | Y74C10AR.3a.1 | Fe-S_biosyn domain-containing protein. | ABC Transporter, Mitochondrial. | 0.949 |
Y55F3AR.2 | C16C10.1 | Y55F3AR.2.1 | C16C10.1.1 | Thioredoxin domain-containing protein. | Uncharacterized mitochondrial carrier C16C10.1. | 0.507 |
abtm-1 | C16C10.1 | Y74C10AR.3a.1 | C16C10.1.1 | ABC Transporter, Mitochondrial. | Uncharacterized mitochondrial carrier C16C10.1. | 0.483 |
abtm-1 | F39H2.3 | Y74C10AR.3a.1 | F39H2.3.2 | ABC Transporter, Mitochondrial. | GCV_T domain-containing protein. | 0.666 |
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