STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-5Homeobox protein ceh-5. (134 aa)    
Predicted Functional Partners:
ceh-32
Homeobox protein ceh-32; Plays a role in head morphogenesis, expression is regulated by vab-3.
   
 
 0.695
nhr-68
NR LBD domain-containing protein.
      
 0.542
nhr-77
Nuclear hormone receptor family member nhr-77; Orphan nuclear receptor; Belongs to the nuclear hormone receptor family.
      
 0.533
ceh-86
Homeobox domain-containing protein.
   
  
 0.486
ceh-76
Homeobox domain-containing protein.
   
  
 0.481
F35B3.1
USP domain-containing protein.
      
 0.461
ceh-92
C. Elegans Homeobox.
      
 0.461
ceh-99
Homeobox domain-containing protein.
      
 0.459
F26H9.2
Uncharacterized protein.
      
 0.445
ceh-74
Homeobox domain-containing protein.
      
 0.424
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.