STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16C8.11Ubiquitin-like domain-containing protein. (214 aa)    
Predicted Functional Partners:
F14H3.5
Uncharacterized protein.
   
  
 0.822
R07E4.5
Uncharacterized protein.
   
 
 0.821
Y54E2A.4
SEC63 domain-containing protein.
    
 
 0.809
msrp-2
MS Related Protein.
      
 0.807
metl-2
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.805
C56C10.11
annotation not available
      
 0.801
nkat-3
Aminotran_1_2 domain-containing protein.
    
 
 0.769
W09C5.1
Uncharacterized protein.
   
 
 0.769
W09C5.7
SAC domain-containing protein.
      
 0.759
rpl-19
60S ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.722
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.