STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16C8.4Ubiquitin-like domain-containing protein. (226 aa)    
Predicted Functional Partners:
ZK688.5
Uncharacterized protein ZK688.5.
   
 
 0.923
B0303.4
Uncharacterized protein B0303.4.
   
 
 0.897
F49C12.9
UBA domain-containing protein.
   
 
 0.893
F52C6.12
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.789
rpl-19
60S ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 
 0.722
rps-30
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.722
uev-2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.721
rpl-34
Ribosomal Protein, Large subunit.
   
 
 0.701
rps-26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 
 0.700
rps-1
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.697
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.